PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_202700_huxy.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family TCP
Protein Properties Length: 314aa    MW: 33020.4 Da    PI: 10.2525
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_202700_huxy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.47.2e-40561842125
                 TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssgka 90 
                         ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++  +++s ss+++++   ++
  Bv9_202700_huxy.t1  56 TVKKAPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStsSPHSLSSTSHHH---QQ 143
                         689*************************************************************9999988864444444444432...23 PP

                 TCP  91 aksaakskksqksaasalnlakesr......akarararer 125
                          +++  + +s+++++++l++   +       ++ r +a+e+
  Bv9_202700_huxy.t1 144 LRTSVLTTSSSDNNNNNLKPTTTTTtpfllgKRLRTTAEEN 184
                         33333333333333323333333333455444444444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.3E-3262162IPR005333Transcription factor, TCP
PROSITE profilePS5136927.89262116IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MSATDGATNG GGGGGGGGVI IDHTHSLSQQ RQAATSTTTT QTTTTTVAAP TSTTLTVKKA  60
PAKDRHSKVD GRGRRIRMPI ICAARVFQLT RELGHKSDGQ TIEWLLRQAE PSIIAATGTG  120
TTPASFSTSS PHSLSSTSHH HQQLRTSVLT TSSSDNNNNN LKPTTTTTTP FLLGKRLRTT  180
AEENEAQNGV VDKEDVTTAS IGVGPATGYW AIPTRPDFWS FAAGPEMVVG PALTQQAAAM  240
AGRFLSHHQH QQQQQHHQHQ QHQVVSLGEP SRVGNYMPIG QGHHLNLLAS LSGAPASATG  300
ASSAAGGRRD DDPR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00524DAPTransfer from AT5G23280Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010688658.10.0PREDICTED: transcription factor TCP21
SwissprotQ9FMX23e-68TCP7_ARATH; Transcription factor TCP7
TrEMBLA0A0J8BRQ80.0A0A0J8BRQ8_BETVU; Uncharacterized protein
STRINGSolyc04g009180.1.12e-72(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.11e-40TCP family protein